How to Quarantine New Chickens Safely (Step-by-Step Guide)

How to Quarantine New Chickens Safely (Step-by-Step Guide)

How to Quarantine New Chickens Safely (Step-by-Step Guide)

Bringing home new chickens is always exciting, but before you let them join your flock, there’s one step you can’t skip—you must quarantine new chickens.

Quarantining new chickens:

  • protects your original flock from diseases
  • protects against spreading unwanted parasites(mites, lice)
  • prevents adding additional stress to your flock that new birds might carry.
It’s not complicated, but it’s absolutely essential for the health of your hens.

Many chicken keepers confuse quarantine with ā€œchicken jail,ā€ but they are very different. In this guide, we’ll cover:

  • why quarantine matters
  • how long it should last
  • what a proper quarantine setup looks like
  • what to watch for during the process.

Why You Must Quarantine New Chickens

When you bring home new birds, they may look healthy on the outside, but many illnesses take days or even weeks to show visible symptoms. A proper quarantine gives you time to detect problems before they spread to your flock.

  • Disease prevention: Respiratory illnesses, Marek’s disease, and coccidiosis can spread quickly in a coop.
  • Parasite control: Mites, lice, and worms often hitch a ride on new chickens.
  • Stress management: New arrivals need a calm environment to adjust without bullying or pecking order fights.

In my own experience, the one time I skipped quarantine, I paid for it dearly—a mite outbreak swept through my entire coop. Since then, I never introduce a bird without a 30-day isolation.

How Long to Quarantine New Chickens

The rule of thumb is clear: quarantine all new chickens for at least 30 days. This allows time for symptoms of common illnesses to appear. Look for these signs:

  • coughing
  • watery eyes
  • lethargy
  • loss of appetite
  • any chicken within the flock isolating itself
  • unusual droppings
If you notice any of these signs, extend the quarantine until the issue is resolved.

Think of quarantine as an insurance policy—it might feel inconvenient, but it’s far less costly than treating an entire sick flock or losing productive layers.

How to Quarantine New Chickens Safely: Separate flocks at least 30'

Setting Up a Proper Quarantine Space

Your quarantine area doesn’t have to be fancy, but it does need to be functional and separate from your main flock. Ideally, keep new birds at least 30 feet away from your established hens.

  • Separate shelter: Use a small coop, dog kennel, or enclosed run that is dry, predator-proof, and draft-free.
  • Dedicated tools: Feeders, waterers, scoops, and gloves should not be shared between flocks.
  • Clean bedding: Use straw or shavings, and refresh weekly.
  • Stress-free comfort: Add Nesting Box Herbs to bedding to keep the space fresh and calming.

Keeping the environment quiet and clean makes it easier to spot signs of illness while also helping new birds feel secure.

Nesting Box Herbs for Chickens

A fragrant blend of marigold, chamomile, peppermint, parsley, rosemary, fennel seed, dandelion, marjoram, and lavender to promote clean, inviting, stress-free nesting areas.

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Daily Quarantine Routine

Consistency is the key to a successful quarantine. Each day, perform these checks and tasks:

  • Feed quarantined birds last: Always care for your main flock first to avoid carrying pathogens back into the coop.
  • Observe symptoms: Look for changes in appetite, energy levels, or droppings.
  • Physical check: Examine eyes, nostrils, combs, wattles, feathers, and vent for abnormalities.
  • Record notes: Keep a simple log of observations—it helps you spot patterns quickly.
  • Herbal support: Calming herbs like chamomile and lavender can reduce stress during this period.

By keeping a close daily watch, you ensure that any issues are caught early before introducing the birds to your flock.

INRODUCING CHICKENS AFTER Quarantine New Chickens

When Quarantine Is Complete

After 30 days, if your new chickens remain symptom-free and energetic, they are ready for gradual introduction to your flock. Quarantine is complete when:

  • No respiratory symptoms, parasites, or unusual droppings have been observed.
  • Birds have steady appetites and consistent activity levels.
  • Egg production, if applicable, looks normal.

When it’s time to integrate, start with a side-by-side pen setup for a few days. Let the birds see each other without direct contact. Follow this with supervised free-ranging together before finally mixing them into the main coop. Herbs such as Cooling Herbs in summer or Warming Herbs in winter can support them during the transition.

Cooling Herbs for Chickens

A refreshing blend of hibiscus, peppermint, rose petals, lemon balm, and chamomile to keep your flock comfortable during hot summer days. Perfect in teas, feed toppers, or dust baths.

Shop Cooling Herbs
WARMING HERBS PRODUCT

Warming Herbs for Chickens

A cozy blend of oregano, thyme, sage, bay leaf, rosemary, and basil to help your chickens stay resilient, comfortable, and healthy during the colder months.

Shop Warming Herbs

Quarantine vs. Chicken Jail

Many chicken keepers mix up the concepts of quarantine and chicken jail, but they serve very different purposes:

  • Quarantine: A 30-day isolation for new birds to prevent the spread of disease or parasites to your flock.
  • Chicken Jail: A temporary holding space for existing flock members that need behavior correction (like broodiness, bullying, or egg eating).

Both are useful tools in chicken keeping, but they are not interchangeable. Quarantine is about biosecurity; chicken jail is about behavior management. Want to learn more about chicken jail and when to use it? Check out my guide: What is Chicken Jail?

Herbal & Natural Support During Quarantine

Adding herbs during quarantine not only helps reduce stress, but it also promotes stronger health while your new birds adjust:

  • Lavender & Chamomile: Naturally calming to ease stress and nervousness.
  • Rosemary & Peppermint: Support respiratory health and digestion.
  • Dandelion Leaf: Boosts immune strength and overall vitality.

My Nesting Box Herbs blend, as well as Cooling Herbs and Warming Herbs, are simple, natural ways to keep the quarantine environment fresh and supportive of flock health.

Nesting Box Herbs for Chickens

Nesting Box Herbs

  • Promotes clean, fresh-smelling nesting areas
  • Calming aromatics reduce hen stress
  • Supports healthier laying environments
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Cooling Herbs for Chickens

Cooling Herbs for Chickens

  • Helps hens stay comfortable in extreme heat
  • Natural cooling support with peppermint & hibiscus
  • Encourages steady laying during hot weather
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Warming Herbs for Chickens

Warming Herbs for Chickens

  • Provides comfort and warmth in cold weather
  • Supports digestion & immune health in winter
  • Blends oregano, thyme, and other warming herbs
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Conclusion

Quarantining new chickens may seem like extra work, but it’s one of the most important steps you can take to protect your flock. A simple 30-day separation can save you from costly vet bills, lost egg production, and the heartbreak of disease spreading through your coop.

When it comes to flock health, prevention is always better than cure. With a proper quarantine routine—and a little herbal support—you’ll set your flock up for long-term success and peace of mind.

Tip: Want to give your chickens a natural boost during quarantine? Explore my full line of herbal blends for chickens.